A Single-Cell Arabidopsis Root Atlas Reveals Developmental Trajectories in Wild-Type and Cell Identity Mutants

Using scRNA-seq, Shahan and Hsu et al. produced an Arabidopsis root atlas, revealing gradual gene expression changes underlying differentiation of cell types and candidate regulators of cell fate. The atlas enabled interpretation of smaller scRNA-seq datasets and revealed new phenotypes in developmental mutants.

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Protocol for Fast scRNA-seq Raw Data Processing Using scKB and Non-Arbitrary Quality Control with COPILOT